Gene detail information of Glyur000477s00024402.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G49760.11.00E-14basic leucine-zipper 5
NRXP_004498959.11.23E-63PREDICTED: G-box-binding factor 2-like [Cicer arietinum]
Swissprottr|P24068|OCS1_MAIZE6.00E-09Ocs element-binding factor 1
trEMBLtr|A0A072VDB1|A0A072VDB1_MEDTR4.00E-57Basic leucine zipper transcription factor {ECO:0000313|EMBL:KEH40004.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004779023690670+


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000477s00024402.1PF07716.10bZIP_2571036.90E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.888
SRR1783600control0.870
SRR1783602moderate drought stress6.966
SRR1811619moderate drought stress6.477

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.801
DRR006520Root Summer glycyrrhizin high producing strain1.818
DRR006521Root Winter glycyrrhizin high producing strain0.510
DRR006522Root Winter glycyrrhizin high producing strain0.872
DRR006523Root Summer glycyrrhizin low producing strain2.074
DRR006524Root Summer glycyrrhizin low producing strain1.789
DRR006525Leaf Summer glycyrrhizin high producing strain2.109
DRR006526Leaf Summer glycyrrhizin high producing strain2.529

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.623
SRR2868004Drought Stress(Tissue:root)7.837
SRR2967015Control (Tissue:root)22.055

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.588
SRR9715740Leave1.529
SRR9715741Leave6.775
SRR9715739Root21.123
SRR9715742Root18.083
SRR9715743Root14.585

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.008
SRR8749028MeJA induced 9h0.141
SRR8749029MeJA induced 9h0.114
SRR8749030Uninduced0.000
SRR8749031Uninduced0.126
SRR8749032Uninduced0.089

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.643
SRR8400027Control-Root9.332

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved