Gene detail information of Glyur000477s00024408.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G22840.11.00E-72growth-regulating factor 1
NRKEH39998.10growth-regulating factor [Medicago truncatula]
Swissprottr|Q6AWY3|GRF6_ORYSJ2.00E-101Growth-regulating factor 6
trEMBLtr|A0A072VEY4|A0A072VEY4_MEDTR0Growth-regulating factor {ECO:0000313|EMBL:KEH39998.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00477143133146784-


Gene family

Gene familysubfamily
Transcription Factors FamilyGRF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0005524  ATP binding

GO:0016818  hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000477s00024408.1PF08880.6QLQ11471.10E-17
Glyur000477s00024408.1PF08879.5WRC811255.70E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.435
SRR1783600control12.537
SRR1783602moderate drought stress16.595
SRR1811619moderate drought stress16.495

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.921
DRR006520Root Summer glycyrrhizin high producing strain4.701
DRR006521Root Winter glycyrrhizin high producing strain4.060
DRR006522Root Winter glycyrrhizin high producing strain3.911
DRR006523Root Summer glycyrrhizin low producing strain4.162
DRR006524Root Summer glycyrrhizin low producing strain3.711
DRR006525Leaf Summer glycyrrhizin high producing strain2.657
DRR006526Leaf Summer glycyrrhizin high producing strain2.631

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.839
SRR2868004Drought Stress(Tissue:root)4.500
SRR2967015Control (Tissue:root)7.174

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.408
SRR9715740Leave3.014
SRR9715741Leave3.949
SRR9715739Root1.231
SRR9715742Root3.252
SRR9715743Root2.121

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.422
SRR8749028MeJA induced 9h2.453
SRR8749029MeJA induced 9h1.242
SRR8749030Uninduced0.431
SRR8749031Uninduced0.830
SRR8749032Uninduced1.172

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.285
SRR8400027Control-Root7.244

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved