Gene detail information of Glyur000478s00024548.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G08370.12.00E-121alpha-galactosidase 2
NRXP_004512698.10PREDICTED: alpha-galactosidase-like isoform X1 [Cicer arietinum]
COGYP_590752.11.00E-90alpha-galactosidase [Candidatus Koribacter versatilis Ellin345]
Swissprottr|P14749|AGAL_CYATE1.00E-179Alpha-galactosidase (Precursor)
trEMBLtr|I1MQD8|I1MQD8_SOYBN0Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00478127089133442-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH27


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07407E3.2.1.22B, galA, rafA EC:3.2.1.22 Galactose metabolism map00052
Glycerolipid metabolismmap00561
Sphingolipid metabolismmap00600
Glycosphingolipid biosynthesis - globo and isoglobo seriesmap00603


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000478s00024548.1PF02065.13Melibiase371431.70E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.561
SRR1783600control12.023
SRR1783602moderate drought stress13.054
SRR1811619moderate drought stress13.134

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.616
DRR006520Root Summer glycyrrhizin high producing strain10.296
DRR006521Root Winter glycyrrhizin high producing strain0.439
DRR006522Root Winter glycyrrhizin high producing strain0.364
DRR006523Root Summer glycyrrhizin low producing strain6.879
DRR006524Root Summer glycyrrhizin low producing strain6.808
DRR006525Leaf Summer glycyrrhizin high producing strain5.567
DRR006526Leaf Summer glycyrrhizin high producing strain5.613

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)41.013
SRR2868004Drought Stress(Tissue:root)31.870
SRR2967015Control (Tissue:root)30.767

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.068
SRR9715740Leave0.326
SRR9715741Leave0.540
SRR9715739Root2.262
SRR9715742Root3.981
SRR9715743Root3.427

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h30.352
SRR8749028MeJA induced 9h40.540
SRR8749029MeJA induced 9h28.288
SRR8749030Uninduced33.836
SRR8749031Uninduced16.008
SRR8749032Uninduced23.991

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.226
SRR8400027Control-Root21.586

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved