Gene detail

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Gene detail information of Glyur000479s00019692.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G16750.1	2.00E-102	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
NR	XP_004505816.1	0	PREDICTED: proline-rich receptor-like protein kinase PERK8-like isoform X1 [Cicer arietinum]
COG	YP_003270695.1	3.00E-16	serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
Swissprot	tr\|Q9SGY7\|PEK11_ARATH	1.00E-55	Putative proline-rich receptor-like protein kinase PERK11
trEMBL	tr\|G7JMD5\|G7JMD5_MEDTR	0	Adenine nucleotide alpha hydrolase-like domain kinase, putative {ECO:0000313\|EMBL:AES89378.2}

Sequence

Transcript Sequence

>Glyur000479s00019692.1
GACTTGTTCTGTGAATTCAAGGAGGAGTATTTGAATCCAGATGAGGTGATTGATATATACAAGGGGAAGCAAAACGAAATGACAGTTGAGAGGAGATTTGTTCTGGTGGGGATTAGAATTGATACACATAGCAGACAGCTCCTTAACTGGGCTCTTGTTAAAGTTGCTGAACCTGGGGATTGTAGCATGATAGATGGCTATTTAGAGGTTTATGAAGGCCTATGTGGTGTGAAGAAGGTTGGTCTCGCTGGTCAAATCTTGACTGGAAGCTCCATCTTTTTTTTTCTTGTTAGAGAAGCTAAAAACCATGCTGCTNTGGCTCTAGTGGTAGGGGGTAGAGCTGCCACAGCTAAATATTGTGCCAAACGACTGCCACCAACCACCAATGTTCTGGCCATCCAAGATTCAAGAATTGTCTTCTTTTTTTGTACCAATAAACAACCACCACCAGGTAGTCTTTTCCTGGATCCAAGGCCAAGTTTTTTTAGCATAGAAAACCTGAGTGACAGAATAATCCAGTCTGAATTCGGTGATTCCGTGGTGGAGAGTGTGAAATCAACATGCCAAAATACCAAGGAATTGAAGGAAGAAGCATTTGATGTTTTTTTAAGGTGCATGTCAAGGTCAATTTCTATGTTTGCAGGTGATCCTGCTAAGCAGAATTTTTTTTGGCCTCTACTCCGCAGAGCCAATTCAGAAGTCTCGCGAAGCAGTCATGGAAGGTTTTTTTCAGTAGTACAATGGGTAATGAGCTTACCAGATCGTTCACCACATAAAAGTCGTCTTTTTTTTTCCATTGAGGAAAACCCATCCGAAAGGAGCATCAGCGACAATGAGGATGAGAGTTTTTTTAGTTCTTCTTCATCTCCATCTGTTGAACTAACAAAAGGACTAGAGGGGATGTTATTTTTTTATTCACTCAATTGCAAGTGGTTCAGCCTTGAGGCCCTGAAGTCTTGCACTAGCCAATTCTCTTCAGAAAACTTAATTGGGAAAGGGGGTAGCAATCGTGTGTACAAAGTTTTTTTCCCAGATGGAAAGCCAATTGCAGTTAAAGTATTGCAGTCATCAAAAGAAGCCTGGAAAGACTTTGCCCTTGAGGTGGAAATAATATCCTCATTGAAGCACAAAAACATCACCCCTTTTTTTTGGATTTGCATAGAGNACAATGCTCTAATNTCTGTTTATGATTATTTCCCCAAAGTTTTTTTAGAGGAAAATCTACATGGAAAGAATAAGGATGGATCCATCTTGTCATGGGAAGTTAGATTTAACATAGCTATTGGGATCGCTTTTTTTTTCAATTACCTTCACAGGGAAGCTTTGAAGCCTGTGATACATAGAGATGTCAAGTCTTCAAACATTCTTCTTTCCCGTGGGTTGGAACCACATTTGTTTTTTTTTGGACTTGCAATATGGGGACCAACAACTTCATCCTTTTTGACACAAGAAGATGTTTTTTTTACATTTGGTTATCTTGCTCCTGAATACTTCATGTATGGAAAGGTCAGTGACAAGATAGATGTCTATGCCTTCGGTGTGGTACTACTTGAACTAATATCAGGTAGGGAACCAATCAGCCCTGAACCTTGCAAAGGACAGGAGAGCTTGGTCGTTTGGGCAATTTTTTTAATAGAGAGTGGGGATATCAAAGGTTTATTGGACCCAAAATTAGAAGGGAAGTTTTTTTTTACCCAAATGCAAAGAATGGTACTAAAGATCCTAAAAGGGGATGATAACGTTGAATATTTGTTCAACTTCCACGGGAATGATCATGAGCATTCAGAAAATGAAGAAAACATTGATGACGAAGTCTATCCAAATTCAAGTGCAGAGTTATTCCTAAGCCTTGCTTTACTTGGTGTAGACGATGACAGTACTTTTTTTAGTAGTACAGATCATAGCTATAGTNAACACTTGAAAGAACAATGGAGCAGGTCGTTTTTTTTTGATTAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00479	26266	30104	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.10.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000479s00019692.1	PF00069.20	Pkinase	327	535	9.60E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.425
SRR1783600	control	0.486
SRR1783602	moderate drought stress	0.292
SRR1811619	moderate drought stress	0.414

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.546
DRR006520	Root Summer glycyrrhizin high producing strain	0.164
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.339
DRR006524	Root Summer glycyrrhizin low producing strain	0.417
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.314
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.461

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	5.798
SRR2868004	Drought Stress(Tissue:root)	8.447
SRR2967015	Control (Tissue:root)	7.947

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.953
SRR9715740	Leave	1.935
SRR9715741	Leave	0.480
SRR9715739	Root	0.120
SRR9715742	Root	1.528
SRR9715743	Root	0.801

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.122
SRR8749028	MeJA induced 9h	0.064
SRR8749029	MeJA induced 9h	0.030
SRR8749030	Uninduced	0.241
SRR8749031	Uninduced	0.340
SRR8749032	Uninduced	0.067

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	5.532
SRR8400027	Control-Root	5.672