Gene detail information of Glyur000479s00019706.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G38620.16.00E-67myb domain protein 4
NRXP_003607200.11.32E-124Myb-like transcription factor [Medicago truncatula]
Swissprottr|P81393|MYB08_ANTMA9.00E-91Myb-related protein 308
trEMBLtr|G7JNF6|G7JNF6_MEDTR5.00E-125Myb transcription factor {ECO:0000313|EMBL:AES89397.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0047999704100744+


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000479s00019706.1PF00249.26Myb_DNA-binding14613.00E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control26.513
SRR1783600control26.557
SRR1783602moderate drought stress34.201
SRR1811619moderate drought stress34.321

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain34.919
DRR006520Root Summer glycyrrhizin high producing strain33.486
DRR006521Root Winter glycyrrhizin high producing strain30.151
DRR006522Root Winter glycyrrhizin high producing strain31.836
DRR006523Root Summer glycyrrhizin low producing strain30.153
DRR006524Root Summer glycyrrhizin low producing strain28.643
DRR006525Leaf Summer glycyrrhizin high producing strain29.137
DRR006526Leaf Summer glycyrrhizin high producing strain32.065

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.813
SRR2868004Drought Stress(Tissue:root)38.222
SRR2967015Control (Tissue:root)50.767

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.769
SRR9715740Leave18.108
SRR9715741Leave31.252
SRR9715739Root7.193
SRR9715742Root15.333
SRR9715743Root12.400

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h58.933
SRR8749028MeJA induced 9h50.243
SRR8749029MeJA induced 9h39.205
SRR8749030Uninduced15.220
SRR8749031Uninduced9.470
SRR8749032Uninduced12.701

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root36.181
SRR8400027Control-Root32.050

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved