Gene detail

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Gene detail information of Glyur000480s00023791.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G66880.1	7.00E-43	Protein kinase superfamily protein
NR	XP_004504581.1	1.87E-168	PREDICTED: probable serine/threonine-protein kinase At1g18390-like [Cicer arietinum]
Swissprot	tr\|P0C5E2\|Y1839_ARATH	2.00E-44	Probable serine/threonine-protein kinase At1g18390 (Precursor)
trEMBL	tr\|K7L5Q8\|K7L5Q8_SOYBN	9.00E-145	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G09990.2}

Sequence

Transcript Sequence

>Glyur000480s00023791.1
ATGGCTTTGCCTATGTATGATCATGTTCACATGATTTCCTCATCCCTTACACCAATATTCACCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTGTTGTTGACCACTTTGCCAACATCCATTTGCCAAGAACAGAACAACAACAAACACGCAGAGTGTAGCAAGCCATACACCTGCGGAGAAATATCCAACATCTACTACCCTTTTTGGGGAGAGAACAGACCCAGTTACTGTGGCAGCAACAAGCAACTCGAGCTCAAGTGTGAGGGCCATCGAAACACATCCATTCAAGTTGGTTCACAAAGCTTCCAAGTGCTGCGCATTGACCAATTGGGTCACACCATGACAATGGTTCGAAAAGGCCTTGTCTATGATAGTTGTTCTTCTGGTTTGATAACCAACACTTCTTTGAACTCGAGTCTCTTTCAGTACATGAACAATGTGAGGAACATAACCATCTTCTACGACTACCACTGCCCTGAAAACAACAACACCGTGCTTCCAAATGCCACAACAAACTCTTTTCAGTGCAGGGAAGATGGGAACAAGAGTGCTTTTTTTGTAGACCCTGCTGCAGCAACTGCTAATGTCCAAAACTGTGAAGGGGTTCGTAGTATTGAAGTTCAGGTAACACAGGAACTGGAGCCAGGTGGTGGTGGAATTGAAGGGCTGAACAAGGCCTTGAGTGCTGGGTTTGATGTGAGATATGTTTCAGATTCTCAAGCATGCTTGAGATGCATTTTGAGTAATGGAACCTGTGGGGCCAATGATGAGTCTCACTTTTCTTGCTATTGCCCGGATGGAACTGATGCTTTAGATTGTTCTCATCACCACAGTGTTGCTGCTGCTGTGGTCAGTGCAGTTGCAGTGGCCATTGCCTTTTATATCTATTATTATAGAAAGAAGAAGAAGAATCTTCAGGCAGTATCATCTATACTATCTCANAGCGTCTCTGATCCTTGTTTAGAAGACACTGAGAAGGGAAGAAAATACCTTGGACTCCTCTTCTTCACCTATATGAAACGCATGTATGAGAACAGTAACAGGAGAGTTGAGCAATTCATGAATGAAGTTGAGATCTTAACTGGCTTACACCATCAAAACCTTGTGTCACTATATGGATGCACTACTCGCCACAGCCGTGAGCTTCTGCTTGTATATGAATACATTCCCAATGGAACTGTTGCTGATCACCTTCATGGGACTCCTGGTTATGTGGATCCAGAATACCATGAGTACTACCAGCTCACTGACAAGAGTGATGTCTATAGCTTTGGGGTTGTGCTGATTGAGCTCATATCATCCATGCCTGCTGTTGATATCTCAAGGCATAGGCATGAGATCAATTTGTCTAACATGGCTGTTAAAAAGATTCAAAATGGGACATTCCATGAGCTTGTGGACCCAACCCTTGGGTTTGAGTCTGATTTCAAGGTAAGGAGAATGATCAATGCAGTGGCAGAGTTAGCATTTCAGTGCTTGCAGAGTTCTCAAGATGTGAGACCTTCTATGGTAGAAGTGTTGGAGAGGCTTAAGGATATACAGAGTGATGGGGGGATATATAAATGCAAACCTGAGGTGATGGATATCTCAGAAGATGATGCTGCTTTGATGAAGAGTGAACCACCACCACCATCACCAGATTCAAAGTTGGTAAGCATATCTACTCCACCTAGTGGAAGAGAATGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00480	51815	55190	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.5.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000480s00023791.1	PF14380.1	WAK_assoc	175	267	1.70E-12
Glyur000480s00023791.1	PF07714.12	Pkinase_Tyr	340	399	2.80E-09
Glyur000480s00023791.1	PF07714.12	Pkinase_Tyr	404	510	5.00E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.022
SRR1783600	control	0.022
SRR1783602	moderate drought stress	0.094
SRR1811619	moderate drought stress	0.088

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.064
DRR006520	Root Summer glycyrrhizin high producing strain	0.123
DRR006521	Root Winter glycyrrhizin high producing strain	0.083
DRR006522	Root Winter glycyrrhizin high producing strain	0.144
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.806
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.646

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	1.866
SRR2868004	Drought Stress(Tissue:root)	5.080
SRR2967015	Control (Tissue:root)	2.756

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.728
SRR9715740	Leave	1.211
SRR9715741	Leave	1.178
SRR9715739	Root	0.004
SRR9715742	Root	0.068
SRR9715743	Root	0.061

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.553
SRR8749028	MeJA induced 9h	0.301
SRR8749029	MeJA induced 9h	0.476
SRR8749030	Uninduced	1.240
SRR8749031	Uninduced	1.664
SRR8749032	Uninduced	0.694

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.732
SRR8400027	Control-Root	0.295