Gene detail information of Glyur000480s00023793.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G66140.1 | 2.00E-31 | zinc finger protein 4 |
| NR | KHN25983.1 | 1.16E-145 | Zinc finger protein 4 [Glycine soja] |
| Swissprot | tr|Q39263|ZFP4_ARATH | 2.00E-37 | Zinc finger protein 4 |
| trEMBL | tr|I1K3D2|I1K3D2_SOYBN | 3.00E-138 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G26990.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00480 | 63490 | 64245 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2H2 |
| EAR motif-containing Proteins | C2H2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.006 |
| SRR1783600 | control | 42.263 |
| SRR1783602 | moderate drought stress | 76.887 |
| SRR1811619 | moderate drought stress | 75.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 56.450 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 56.991 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 110.571 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 117.599 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 45.389 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 45.226 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 70.380 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 71.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 92.138 |
| SRR2868004 | Drought Stress(Tissue:root) | 193.229 |
| SRR2967015 | Control (Tissue:root) | 253.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 145.573 |
| SRR9715740 | Leave | 206.147 |
| SRR9715741 | Leave | 145.296 |
| SRR9715739 | Root | 25.839 |
| SRR9715742 | Root | 54.004 |
| SRR9715743 | Root | 43.142 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.100 |
| SRR8749028 | MeJA induced 9h | 7.672 |
| SRR8749029 | MeJA induced 9h | 8.205 |
| SRR8749030 | Uninduced | 1.655 |
| SRR8749031 | Uninduced | 0.169 |
| SRR8749032 | Uninduced | 1.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 71.619 |
| SRR8400027 | Control-Root | 83.927 |