Gene detail information of Glyur000480s00023800.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G25220.15.00E-106anthranilate synthase beta subunit 1
NRXP_004514366.12.45E-146PREDICTED: anthranilate synthase component II-like isoform X1 [Cicer arietinum]
COGYP_003890707.19.00E-75glutamine amidotransferase of anthranilate synthase [Cyanothece sp. PCC 7822]
Swissprottr|Q42565|ASB1_ARATH2.00E-132Anthranilate synthase beta subunit 1, chloroplastic (Precursor)
trEMBLtr|B7FJB9|B7FJB9_MEDTR7.00E-145Uncharacterized protein {ECO:0000313|EMBL:AFK37352.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00480104025107962-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01658trpG EC:4.1.3.27 Biosynthesis of amino acids map01230
Phenylalanine, tyrosine and tryptophan biosynthesismap00400
Quorum sensingmap02024
Biofilm formation - Pseudomonas aeruginosamap02025


Gene Ontology

biological_process

GO:0008152  metabolic process



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000480s00023800.1PF00117.23GATase802682.10E-51


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.962
SRR1783600control27.780
SRR1783602moderate drought stress28.535
SRR1811619moderate drought stress28.712

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain39.295
DRR006520Root Summer glycyrrhizin high producing strain39.295
DRR006521Root Winter glycyrrhizin high producing strain8.017
DRR006522Root Winter glycyrrhizin high producing strain7.597
DRR006523Root Summer glycyrrhizin low producing strain27.449
DRR006524Root Summer glycyrrhizin low producing strain26.158
DRR006525Leaf Summer glycyrrhizin high producing strain21.416
DRR006526Leaf Summer glycyrrhizin high producing strain20.741

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)53.080
SRR2868004Drought Stress(Tissue:root)42.115
SRR2967015Control (Tissue:root)41.387

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave30.961
SRR9715740Leave18.714
SRR9715741Leave27.576
SRR9715739Root18.033
SRR9715742Root34.827
SRR9715743Root29.026

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h49.844
SRR8749028MeJA induced 9h32.894
SRR8749029MeJA induced 9h51.463
SRR8749030Uninduced34.376
SRR8749031Uninduced25.645
SRR8749032Uninduced23.873

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root64.839
SRR8400027Control-Root61.693

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved