Gene detail information of Glyur000482s00021725.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G48000.14.00E-176aldehyde dehydrogenase 2B4
NRKEH35051.10NAD-dependent aldehyde dehydrogenase family protein [Medicago truncatula]
COGYP_722268.13.00E-145aldehyde dehydrogenase [Trichodesmium erythraeum IMS101]
Swissprottr|Q9SU63|AL2B4_ARATH0Aldehyde dehydrogenase family 2 member B4, mitochondrial (Precursor)
trEMBLtr|A0A072V015|A0A072V015_MEDTR0NAD-dependent aldehyde dehydrogenase family protein {ECO:0000313|EMBL:KEH35051.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004823163735915+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00128ALDH EC:1.2.1.3 Glycolysis / Gluconeogenesis map00010
Ascorbate and aldarate metabolismmap00053
Pyruvate metabolismmap00620
Fatty acid degradationmap00071
Glycerolipid metabolismmap00561
Valine, leucine and isoleucine degradationmap00280
Lysine degradationmap00310
Arginine and proline metabolismmap00330
Histidine metabolismmap00340
Tryptophan metabolismmap00380
beta-Alanine metabolismmap00410
Insect hormone biosynthesismap00981
Limonene and pinene degradationmap00903
Chloroalkane and chloroalkene degradationmap00625


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000482s00021725.1PF00171.17Aldedh1454882.50E-122


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.273
SRR1783600control0.305
SRR1783602moderate drought stress0.776
SRR1811619moderate drought stress0.760

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.671
DRR006520Root Summer glycyrrhizin high producing strain0.790
DRR006521Root Winter glycyrrhizin high producing strain1.133
DRR006522Root Winter glycyrrhizin high producing strain0.932
DRR006523Root Summer glycyrrhizin low producing strain0.006
DRR006524Root Summer glycyrrhizin low producing strain0.074
DRR006525Leaf Summer glycyrrhizin high producing strain0.224
DRR006526Leaf Summer glycyrrhizin high producing strain0.240

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.456
SRR2868004Drought Stress(Tissue:root)1.291
SRR2967015Control (Tissue:root)0.862

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.244
SRR9715740Leave0.212
SRR9715741Leave0.388
SRR9715739Root0.303
SRR9715742Root1.791
SRR9715743Root1.640

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.052
SRR8749028MeJA induced 9h0.072
SRR8749029MeJA induced 9h0.004
SRR8749030Uninduced0.088
SRR8749031Uninduced0.041
SRR8749032Uninduced0.054

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.405
SRR8400027Control-Root1.479

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved