Gene detail information of Glyur000482s00021729.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G50000.10Protein kinase superfamily protein
NRXP_003527023.10PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max]
COGYP_001958461.13.00E-32hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q2MHE4|HT1_ARATH4.00E-65Serine/threonine-protein kinase HT1
trEMBLtr|I1KCH4|I1KCH4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G19500.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004824751051910-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000482s00021729.1PF07714.12Pkinase_Tyr873591.70E-63


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.807
SRR1783600control13.820
SRR1783602moderate drought stress11.048
SRR1811619moderate drought stress10.729

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.723
DRR006520Root Summer glycyrrhizin high producing strain26.022
DRR006521Root Winter glycyrrhizin high producing strain16.085
DRR006522Root Winter glycyrrhizin high producing strain15.638
DRR006523Root Summer glycyrrhizin low producing strain33.154
DRR006524Root Summer glycyrrhizin low producing strain33.340
DRR006525Leaf Summer glycyrrhizin high producing strain18.376
DRR006526Leaf Summer glycyrrhizin high producing strain18.174

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.860
SRR2868004Drought Stress(Tissue:root)35.833
SRR2967015Control (Tissue:root)36.780

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave43.544
SRR9715740Leave33.470
SRR9715741Leave44.027
SRR9715739Root6.113
SRR9715742Root19.092
SRR9715743Root16.872

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.346
SRR8749028MeJA induced 9h42.028
SRR8749029MeJA induced 9h20.810
SRR8749030Uninduced13.306
SRR8749031Uninduced5.216
SRR8749032Uninduced5.838

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.592
SRR8400027Control-Root28.988

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved