Gene detail information of Glyur000482s00021731.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10586.1 | 5.00E-15 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_007138091.1 | 3.29E-93 | hypothetical protein PHAVU_009G179600g [Phaseolus vulgaris] |
| trEMBL | tr|V7AXR4|V7AXR4_PHAVU | 1.00E-93 | Uncharacterized protein {ECO:0000313|EMBL:ESW10085.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00482 | 65145 | 66824 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000482s00021731.1 | PF00010.21 | HLH | 16 | 66 | 1.70E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.249 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.115 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.141 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.119 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.884 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.299 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.640 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.147 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.171 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.186 |
| SRR2967015 | Control (Tissue:root) | 0.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 93.651 |
| SRR9715740 | Leave | 14.888 |
| SRR9715741 | Leave | 87.344 |
| SRR9715739 | Root | 0.189 |
| SRR9715742 | Root | 1.361 |
| SRR9715743 | Root | 1.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.761 |
| SRR8749028 | MeJA induced 9h | 9.597 |
| SRR8749029 | MeJA induced 9h | 2.233 |
| SRR8749030 | Uninduced | 6.460 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.377 |
| SRR8400027 | Control-Root | 0.237 |