Gene detail information of Glyur000484s00024951.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G15050.1 | 8.00E-148 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| NR | XP_006578444.1 | 0 | PREDICTED: xylosyltransferase 2-like [Glycine max] |
| trEMBL | tr|I1JW61|I1JW61_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G18960.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00484 | 31688 | 37067 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT14 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000484s00024951.1 | PF02485.16 | Branch | 83 | 342 | 1.00E-65 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.113 |
| SRR1783600 | control | 4.043 |
| SRR1783602 | moderate drought stress | 5.625 |
| SRR1811619 | moderate drought stress | 5.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.537 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.280 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.181 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.097 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.800 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.850 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.455 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.007 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.730 |
| SRR2967015 | Control (Tissue:root) | 5.241 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 13.793 |
| SRR9715740 | Leave | 12.383 |
| SRR9715741 | Leave | 16.440 |
| SRR9715739 | Root | 2.406 |
| SRR9715742 | Root | 5.736 |
| SRR9715743 | Root | 5.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.311 |
| SRR8749028 | MeJA induced 9h | 4.885 |
| SRR8749029 | MeJA induced 9h | 2.718 |
| SRR8749030 | Uninduced | 1.823 |
| SRR8749031 | Uninduced | 0.757 |
| SRR8749032 | Uninduced | 1.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.926 |
| SRR8400027 | Control-Root | 4.868 |