Gene detail information of Glyur000484s00024966.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G38260.13.00E-104Protein kinase superfamily protein
NRXP_003535924.20PREDICTED: probable receptor-like protein kinase At1g67000-like [Glycine max]
COGYP_001958461.13.00E-24hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9FID6|Y5392_ARATH2.00E-118Probable receptor-like protein kinase At5g39020 (Precursor)
trEMBLtr|K7LIP9|K7LIP9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G20918.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00484148911151149+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000484s00024966.1PF00069.20Pkinase3205893.70E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.170
SRR1783600control0.152
SRR1783602moderate drought stress0.020
SRR1811619moderate drought stress0.019

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.954
DRR006520Root Summer glycyrrhizin high producing strain0.930
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.279
DRR006524Root Summer glycyrrhizin low producing strain0.285
DRR006525Leaf Summer glycyrrhizin high producing strain1.132
DRR006526Leaf Summer glycyrrhizin high producing strain1.083

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.467
SRR2868004Drought Stress(Tissue:root)1.454
SRR2967015Control (Tissue:root)2.348

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave41.282
SRR9715740Leave23.963
SRR9715741Leave55.957
SRR9715739Root3.647
SRR9715742Root13.714
SRR9715743Root9.934

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.343
SRR8749028MeJA induced 9h2.238
SRR8749029MeJA induced 9h0.712
SRR8749030Uninduced20.920
SRR8749031Uninduced2.963
SRR8749032Uninduced2.556

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.021
SRR8400027Control-Root1.755

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved