Gene detail information of Glyur000486s00021132.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006591977.1 | 0 | PREDICTED: histone-lysine N-methyltransferase 2D-like isoform X1 [Glycine max] |
| trEMBL | tr|I1LNW0|I1LNW0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G01030.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00486 | 82535 | 87143 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | RING |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.068 |
| SRR1783600 | control | 17.048 |
| SRR1783602 | moderate drought stress | 27.311 |
| SRR1811619 | moderate drought stress | 27.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.091 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.106 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.695 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.633 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.081 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.148 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.498 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 20.253 |
| SRR2868004 | Drought Stress(Tissue:root) | 22.476 |
| SRR2967015 | Control (Tissue:root) | 25.535 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.908 |
| SRR9715740 | Leave | 8.697 |
| SRR9715741 | Leave | 8.646 |
| SRR9715739 | Root | 8.117 |
| SRR9715742 | Root | 24.149 |
| SRR9715743 | Root | 19.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.479 |
| SRR8749028 | MeJA induced 9h | 19.787 |
| SRR8749029 | MeJA induced 9h | 11.737 |
| SRR8749030 | Uninduced | 4.911 |
| SRR8749031 | Uninduced | 5.379 |
| SRR8749032 | Uninduced | 3.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 17.409 |
| SRR8400027 | Control-Root | 16.817 |