Gene detail information of Glyur000487s00025929.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10680.1 | 7.00E-09 | P-glycoprotein 10 |
| NR | XP_006385671.1 | 3.14E-09 | hypothetical protein POPTR_0003s09320g [Populus trichocarpa] |
| Swissprot | tr|Q9SGY1|AB10B_ARATH | 3.00E-10 | ABC transporter B family member 10 |
| trEMBL | tr|U5GJ07|U5GJ07_POPTR | 1.00E-09 | Uncharacterized protein {ECO:0000313|EMBL:ERP63468.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00487 | 81860 | 82389 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K05658 | ABCB1, CD243 | EC:3.6.3.44 | ABC transporters | map02010 |
| Bile secretion | map04976 | |||
| MicroRNAs in cancer | map05206 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.904 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.731 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.890 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.441 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.493 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.017 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.281 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.666 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.051 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.019 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.016 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.271 |
| SRR8400027 | Control-Root | 0.073 |