Gene detail information of Glyur000487s00025935.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G03450.1 | 0 | RGA-like 2 |
| NR | XP_007163387.1 | 0 | hypothetical protein PHAVU_001G230500g [Phaseolus vulgaris] |
| Swissprot | tr|Q8S4W7|GAI1_VITVI | 0 | DELLA protein GAI1 |
| trEMBL | tr|V7D2D1|V7D2D1_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW35381.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00487 | 137961 | 139784 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRAS |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000487s00025935.1 | PF12041.3 | DELLA | 52 | 121 | 4.10E-37 |
| Glyur000487s00025935.1 | PF03514.9 | GRAS | 225 | 601 | 9.70E-137 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.416 |
| SRR1783600 | control | 31.877 |
| SRR1783602 | moderate drought stress | 45.544 |
| SRR1811619 | moderate drought stress | 45.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 65.053 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 65.603 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 40.895 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 38.908 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 62.166 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 60.351 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 77.136 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 75.581 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 60.954 |
| SRR2868004 | Drought Stress(Tissue:root) | 55.164 |
| SRR2967015 | Control (Tissue:root) | 68.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 55.985 |
| SRR9715740 | Leave | 39.475 |
| SRR9715741 | Leave | 52.486 |
| SRR9715739 | Root | 67.430 |
| SRR9715742 | Root | 103.916 |
| SRR9715743 | Root | 97.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.385 |
| SRR8749028 | MeJA induced 9h | 28.450 |
| SRR8749029 | MeJA induced 9h | 23.956 |
| SRR8749030 | Uninduced | 32.393 |
| SRR8749031 | Uninduced | 4.331 |
| SRR8749032 | Uninduced | 7.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 39.660 |
| SRR8400027 | Control-Root | 58.995 |