Gene detail information of Glyur000489s00017477.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G64530.1 | 2.00E-49 | xylem NAC domain 1 |
| NR | XP_003523223.1 | 1.14E-99 | PREDICTED: NAC transcription factor 25 [Glycine max] |
| Swissprot | tr|Q8GY42|NAC25_ARATH | 6.00E-34 | NAC transcription factor 25 |
| trEMBL | tr|I1JY11|I1JY11_SOYBN | 4.00E-100 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G38990.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00489 | 23829 | 25017 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000489s00017477.1 | PF02365.10 | NAM | 8 | 123 | 1.70E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.145 |
| SRR1783600 | control | 0.145 |
| SRR1783602 | moderate drought stress | 0.269 |
| SRR1811619 | moderate drought stress | 0.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.405 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.054 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.624 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.533 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.078 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.162 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.374 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.781 |
| SRR2868004 | Drought Stress(Tissue:root) | 10.917 |
| SRR2967015 | Control (Tissue:root) | 10.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.363 |
| SRR9715741 | Leave | 0.086 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.770 |
| SRR9715743 | Root | 0.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.177 |
| SRR8749029 | MeJA induced 9h | 0.211 |
| SRR8749030 | Uninduced | 1.073 |
| SRR8749031 | Uninduced | 0.870 |
| SRR8749032 | Uninduced | 3.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.672 |
| SRR8400027 | Control-Root | 3.457 |