Gene detail information of Glyur000489s00017491.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G13570.1 | 4.00E-49 | nuclear factor Y, subunit B7 |
| NR | XP_003524310.1 | 1.23E-101 | PREDICTED: nuclear transcription factor Y subunit B-7-like [Glycine max] |
| Swissprot | tr|Q9SIT9|NFYB7_ARATH | 4.00E-64 | Nuclear transcription factor Y subunit B-7 |
| trEMBL | tr|I1K511|I1K511_SOYBN | 5.00E-102 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G32680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00489 | 59392 | 60036 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NF-YB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000489s00017491.1 | PF00808.18 | CBFD_NFYB_HMF | 45 | 109 | 1.30E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.059 |
| SRR1811619 | moderate drought stress | 0.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.168 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.167 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.173 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.169 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.177 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.128 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.267 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.066 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.331 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.048 |
| SRR9715743 | Root | 0.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.190 |
| SRR8749028 | MeJA induced 9h | 0.208 |
| SRR8749029 | MeJA induced 9h | 0.094 |
| SRR8749030 | Uninduced | 0.197 |
| SRR8749031 | Uninduced | 0.118 |
| SRR8749032 | Uninduced | 0.088 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.061 |