Gene detail information of Glyur000489s00017497.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G63940.13.00E-173Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
NRXP_004502962.10PREDICTED: proline-rich receptor-like protein kinase PERK14-like [Cicer arietinum]
COGYP_004463009.18.00E-21serine/threonine protein kinase with PASTA sensor(s) [Mahella australiensis 50-1 BON]
Swissprottr|Q8H1D6|RBK1_ARATH2.00E-68Receptor-like cytosolic serine/threonine-protein kinase RBK1
trEMBLtr|I1JXZ6|I1JXZ6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G38770.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00489103583107571-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.10.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0006950  response to stress


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000489s00017497.1PF00582.21Usp111377.00E-09
Glyur000489s00017497.1PF00069.20Pkinase3604177.60E-06
Glyur000489s00017497.1PF00069.20Pkinase4245457.70E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.536
SRR1783600control14.353
SRR1783602moderate drought stress10.384
SRR1811619moderate drought stress10.220

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.540
DRR006520Root Summer glycyrrhizin high producing strain14.510
DRR006521Root Winter glycyrrhizin high producing strain8.689
DRR006522Root Winter glycyrrhizin high producing strain8.471
DRR006523Root Summer glycyrrhizin low producing strain7.518
DRR006524Root Summer glycyrrhizin low producing strain7.538
DRR006525Leaf Summer glycyrrhizin high producing strain8.235
DRR006526Leaf Summer glycyrrhizin high producing strain8.160

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)35.517
SRR2868004Drought Stress(Tissue:root)30.738
SRR2967015Control (Tissue:root)31.213

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.011
SRR9715740Leave10.902
SRR9715741Leave8.257
SRR9715739Root5.307
SRR9715742Root9.773
SRR9715743Root10.288

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.398
SRR8749028MeJA induced 9h2.251
SRR8749029MeJA induced 9h0.710
SRR8749030Uninduced1.762
SRR8749031Uninduced0.570
SRR8749032Uninduced0.704

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.212
SRR8400027Control-Root28.931

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved