Gene detail information of Glyur000489s00017501.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G63910.12.00E-159farnesylcysteine lyase
NRXP_004502965.10PREDICTED: farnesylcysteine lyase-like isoform X1 [Cicer arietinum]
Swissprottr|P57681|PCYOX_ARATH0Farnesylcysteine lyase (Precursor)
trEMBLtr|I1KBM2|I1KBM2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G16230.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00489151089154380+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05906PCYOX1, FCLY EC:1.8.3.5 1.8.3.6 Terpenoid backbone biosynthesis map00900


Gene Ontology

biological_process

GO:0030328  prenylcysteine catabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0001735  prenylcysteine oxidase activity

GO:0016670  oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000489s00017501.1PF13450.1NAD_binding_832924.90E-12
Glyur000489s00017501.1PF07156.9Prenylcys_lyase1524791.70E-111


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.992
SRR1783600control22.124
SRR1783602moderate drought stress23.936
SRR1811619moderate drought stress23.963

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain31.297
DRR006520Root Summer glycyrrhizin high producing strain31.072
DRR006521Root Winter glycyrrhizin high producing strain37.637
DRR006522Root Winter glycyrrhizin high producing strain36.704
DRR006523Root Summer glycyrrhizin low producing strain31.467
DRR006524Root Summer glycyrrhizin low producing strain31.727
DRR006525Leaf Summer glycyrrhizin high producing strain21.952
DRR006526Leaf Summer glycyrrhizin high producing strain21.664

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)41.477
SRR2868004Drought Stress(Tissue:root)33.688
SRR2967015Control (Tissue:root)45.811

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.049
SRR9715740Leave25.915
SRR9715741Leave38.420
SRR9715739Root17.299
SRR9715742Root23.919
SRR9715743Root21.397

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.168
SRR8749028MeJA induced 9h14.179
SRR8749029MeJA induced 9h7.601
SRR8749030Uninduced14.488
SRR8749031Uninduced7.679
SRR8749032Uninduced8.134

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.605
SRR8400027Control-Root29.757

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved