Gene detail information of Glyur000491s00023694.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT4G37670.2 | 0 | N-acetyl-l-glutamate synthase 2 |
NR | XP_004511825.1 | 0 | PREDICTED: amino-acid acetyltransferase-like isoform X1 [Cicer arietinum] |
COG | YP_007504331.1 | 4.00E-69 | N-acetylglutamate synthase [Morganella morganii subsp. morganii KT] |
Swissprot | tr|B5X4Z4|NAGS2_ARATH | 0 | Probable amino-acid acetyltransferase NAGS2, chloroplastic (Precursor) |
trEMBL | tr|V7CEZ9|V7CEZ9_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW28699.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00491 | 10464 | 15237 | - |
Gene family
Gene family | subfamily |
---|---|
Transcription Factors Family | GNAT |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K14682 | argAB | EC:2.3.1.1 | 2-Oxocarboxylic acid metabolism | map01210 |
Biosynthesis of amino acids | map01230 | |||
Arginine biosynthesis | map00220 |
Gene Ontology
|
Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000491s00023694.1 | PF00696.23 | AA_kinase | 129 | 328 | 9.70E-10 |
Glyur000491s00023694.1 | PF00583.19 | Acetyltransf_1 | 498 | 563 | 1.10E-11 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 27.215 |
SRR1783600 | control | 27.266 |
SRR1783602 | moderate drought stress | 30.693 |
SRR1811619 | moderate drought stress | 29.927 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 21.933 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 21.660 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 62.841 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 60.538 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 27.520 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 27.835 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 38.137 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 37.941 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 19.633 |
SRR2868004 | Drought Stress(Tissue:root) | 29.843 |
SRR2967015 | Control (Tissue:root) | 32.630 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 50.562 |
SRR9715740 | Leave | 95.052 |
SRR9715741 | Leave | 61.941 |
SRR9715739 | Root | 12.311 |
SRR9715742 | Root | 28.413 |
SRR9715743 | Root | 24.979 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 9.332 |
SRR8749028 | MeJA induced 9h | 12.984 |
SRR8749029 | MeJA induced 9h | 10.061 |
SRR8749030 | Uninduced | 17.887 |
SRR8749031 | Uninduced | 35.330 |
SRR8749032 | Uninduced | 15.480 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 27.210 |
SRR8400027 | Control-Root | 29.620 |