Gene detail information of Glyur000492s00023501.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G67400.17.00E-50root hair specific 19
NRCAA62228.11.67E-80peroxidase2 [Medicago sativa]
Swissprottr|Q43873|PER73_ARATH3.00E-60Peroxidase 73 (Precursor)
trEMBLtr|O24080|O24080_MEDSA6.00E-81Peroxidase2 {ECO:0000313|EMBL:CAA62228.1} (Precursor)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0049245065661+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000492s00023501.1PF00141.18peroxidase101166.20E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control966.488
SRR1783600control965.629
SRR1783602moderate drought stress1538.100
SRR1811619moderate drought stress1493.102

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain276.151
DRR006520Root Summer glycyrrhizin high producing strain285.954
DRR006521Root Winter glycyrrhizin high producing strain394.487
DRR006522Root Winter glycyrrhizin high producing strain386.061
DRR006523Root Summer glycyrrhizin low producing strain360.872
DRR006524Root Summer glycyrrhizin low producing strain360.282
DRR006525Leaf Summer glycyrrhizin high producing strain289.951
DRR006526Leaf Summer glycyrrhizin high producing strain279.569

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)303.055
SRR2868004Drought Stress(Tissue:root)375.019
SRR2967015Control (Tissue:root)241.500

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave299.360
SRR9715740Leave47.878
SRR9715741Leave183.894
SRR9715739Root329.560
SRR9715742Root348.538
SRR9715743Root336.853

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h248.946
SRR8749028MeJA induced 9h132.247
SRR8749029MeJA induced 9h236.520
SRR8749030Uninduced998.878
SRR8749031Uninduced456.646
SRR8749032Uninduced663.264

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root349.877
SRR8400027Control-Root396.916

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved