Gene detail information of Glyur000492s00023515.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23060.1 | 5.00E-163 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | XP_003550977.1 | 0 | PREDICTED: probable N-acetyltransferase HLS1-like [Glycine max] |
| COG | YP_008433243.1 | 4.00E-08 | hypothetical protein N186_09470 [Thermofilum sp. 1910b] |
| Swissprot | tr|O64815|HLS1L_ARATH | 0 | Probable N-acetyltransferase HLS1-like |
| trEMBL | tr|I1MVM5|I1MVM5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G17510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00492 | 81108 | 82898 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000492s00023515.1 | PF00583.19 | Acetyltransf_1 | 114 | 188 | 1.40E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.354 |
| SRR1783600 | control | 0.342 |
| SRR1783602 | moderate drought stress | 0.374 |
| SRR1811619 | moderate drought stress | 0.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.543 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.618 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.700 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.716 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.868 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.727 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 20.087 |
| SRR2868004 | Drought Stress(Tissue:root) | 32.871 |
| SRR2967015 | Control (Tissue:root) | 30.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.868 |
| SRR9715740 | Leave | 1.414 |
| SRR9715741 | Leave | 0.420 |
| SRR9715739 | Root | 1.613 |
| SRR9715742 | Root | 0.894 |
| SRR9715743 | Root | 1.406 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.669 |
| SRR8749028 | MeJA induced 9h | 3.183 |
| SRR8749029 | MeJA induced 9h | 1.642 |
| SRR8749030 | Uninduced | 0.192 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.462 |
| SRR8400027 | Control-Root | 1.378 |