Gene detail information of Glyur000492s00023521.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G14750.11.00E-91APS kinase
NRXP_007155832.13.14E-160hypothetical protein PHAVU_003G235300g [Phaseolus vulgaris]
COGYP_003704410.16.00E-81adenylylsulfate kinase [Truepera radiovictrix DSM 17093]
Swissprottr|O49204|KAPS_CATRO4.00E-114Adenylyl-sulfate kinase, chloroplastic (Precursor)
trEMBLtr|V7CFZ8|V7CFZ8_PHAVU1.00E-160Adenylyl-sulfate kinase {ECO:0000256|RuleBase:RU004347}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00492119462125280+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00860cysC EC:2.7.1.25 Sulfur metabolism map00920
Purine metabolismmap00230


Gene Ontology

biological_process

GO:0000103  sulfate assimilation


molecular_function

GO:0004020  adenylylsulfate kinase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000492s00023521.2PF01583.15APS_kinase1493016.90E-70


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.132
SRR1783600control4.172
SRR1783602moderate drought stress3.177
SRR1811619moderate drought stress3.119

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.237
DRR006520Root Summer glycyrrhizin high producing strain11.153
DRR006521Root Winter glycyrrhizin high producing strain4.806
DRR006522Root Winter glycyrrhizin high producing strain4.687
DRR006523Root Summer glycyrrhizin low producing strain15.202
DRR006524Root Summer glycyrrhizin low producing strain14.992
DRR006525Leaf Summer glycyrrhizin high producing strain6.658
DRR006526Leaf Summer glycyrrhizin high producing strain6.482

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.002
SRR2868004Drought Stress(Tissue:root)12.951
SRR2967015Control (Tissue:root)15.238

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.209
SRR9715740Leave10.700
SRR9715741Leave9.835
SRR9715739Root7.814
SRR9715742Root14.639
SRR9715743Root13.002

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h53.452
SRR8749028MeJA induced 9h50.853
SRR8749029MeJA induced 9h60.312
SRR8749030Uninduced32.249
SRR8749031Uninduced33.200
SRR8749032Uninduced24.303

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.091
SRR8400027Control-Root12.743

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved