Gene detail information of Glyur000494s00017389.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G60690.10Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
NRXP_007132262.10hypothetical protein PHAVU_011G079800g [Phaseolus vulgaris]
Swissprottr|Q9SE43|REV_ARATH0Homeobox-leucine zipper protein REVOLUTA
trEMBLtr|V7AJI7|V7AJI7_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW04256.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004942294429843-


Gene family

Gene familysubfamily
Transcription Factors FamilyHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0008289  lipid binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000494s00017389.1PF00046.24Homeobox27857.80E-16
Glyur000494s00017389.1PF01852.14START1673741.90E-45
Glyur000494s00017389.1PF08670.6MEKHLA7058382.60E-55


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.993
SRR1783600control12.100
SRR1783602moderate drought stress15.252
SRR1811619moderate drought stress15.127

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.826
DRR006520Root Summer glycyrrhizin high producing strain18.476
DRR006521Root Winter glycyrrhizin high producing strain15.286
DRR006522Root Winter glycyrrhizin high producing strain14.887
DRR006523Root Summer glycyrrhizin low producing strain19.410
DRR006524Root Summer glycyrrhizin low producing strain19.392
DRR006525Leaf Summer glycyrrhizin high producing strain4.522
DRR006526Leaf Summer glycyrrhizin high producing strain4.568

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.337
SRR2868004Drought Stress(Tissue:root)39.705
SRR2967015Control (Tissue:root)47.978

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.887
SRR9715740Leave5.742
SRR9715741Leave7.150
SRR9715739Root6.326
SRR9715742Root44.555
SRR9715743Root36.138

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.882
SRR8749028MeJA induced 9h8.102
SRR8749029MeJA induced 9h7.911
SRR8749030Uninduced0.790
SRR8749031Uninduced0.242
SRR8749032Uninduced0.795

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root52.107
SRR8400027Control-Root58.439

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved