Gene detail information of Glyur000494s00017401.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G60640.10PDI-like 1-4
NRXP_004505990.10PREDICTED: protein disulfide isomerase-like 1-4-like [Cicer arietinum]
COGYP_002607911.14.00E-13thioredoxin [Nautilia profundicola AmH]
Swissprottr|Q9FF55|PDI14_ARATH0Protein disulfide isomerase-like 1-4 (Precursor)
trEMBLtr|G7JPD1|G7JPD1_MEDTR0Protein disulfide-isomerase {ECO:0000256|RuleBase:RU361130}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004947298177116+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09580PDIA1, P4HB EC:5.3.4.1 Protein processing in endoplasmic reticulum map04141


Gene Ontology

biological_process

GO:0045454  cell redox homeostasis


cellular_component

GO:0005783  endoplasmic reticulum


molecular_function

GO:0016853  isomerase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000494s00017401.1PF00085.15Thioredoxin1032032.50E-30
Glyur000494s00017401.1PF13848.1Thioredoxin_62454153.80E-26
Glyur000494s00017401.1PF00085.15Thioredoxin4415461.20E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control148.834
SRR1783600control148.819
SRR1783602moderate drought stress103.404
SRR1811619moderate drought stress103.157

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain96.084
DRR006520Root Summer glycyrrhizin high producing strain94.689
DRR006521Root Winter glycyrrhizin high producing strain51.257
DRR006522Root Winter glycyrrhizin high producing strain50.807
DRR006523Root Summer glycyrrhizin low producing strain62.088
DRR006524Root Summer glycyrrhizin low producing strain61.616
DRR006525Leaf Summer glycyrrhizin high producing strain40.917
DRR006526Leaf Summer glycyrrhizin high producing strain41.096

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)193.554
SRR2868004Drought Stress(Tissue:root)127.973
SRR2967015Control (Tissue:root)139.109

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave81.021
SRR9715740Leave69.567
SRR9715741Leave72.545
SRR9715739Root69.772
SRR9715742Root114.684
SRR9715743Root106.664

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h198.151
SRR8749028MeJA induced 9h126.045
SRR8749029MeJA induced 9h124.155
SRR8749030Uninduced54.805
SRR8749031Uninduced47.616
SRR8749032Uninduced46.005

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root153.608
SRR8400027Control-Root150.320

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved