Gene detail information of Glyur000494s00017409.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G60550.11.00E-158geminivirus rep interacting kinase 2
NRXP_004505984.10PREDICTED: serine/threonine-protein kinase GRIK2-like [Cicer arietinum]
COGYP_006403390.17.00E-28serine/threonine protein kinase [Sulfurospirillum barnesii SES-3]
Swissprottr|Q5HZ38|GRIK2_ARATH0Serine/threonine-protein kinase GRIK2
trEMBLtr|V7AF83|V7AF83_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW04237.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00494114246119208-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.7


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000494s00017409.1PF00069.20Pkinase1203782.90E-55


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.119
SRR1783600control21.227
SRR1783602moderate drought stress17.797
SRR1811619moderate drought stress17.814

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain27.487
DRR006520Root Summer glycyrrhizin high producing strain27.214
DRR006521Root Winter glycyrrhizin high producing strain23.177
DRR006522Root Winter glycyrrhizin high producing strain22.644
DRR006523Root Summer glycyrrhizin low producing strain19.837
DRR006524Root Summer glycyrrhizin low producing strain19.881
DRR006525Leaf Summer glycyrrhizin high producing strain13.688
DRR006526Leaf Summer glycyrrhizin high producing strain13.702

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)41.815
SRR2868004Drought Stress(Tissue:root)37.227
SRR2967015Control (Tissue:root)34.769

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.318
SRR9715740Leave23.848
SRR9715741Leave21.599
SRR9715739Root8.584
SRR9715742Root15.423
SRR9715743Root16.142

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h45.424
SRR8749028MeJA induced 9h27.135
SRR8749029MeJA induced 9h31.367
SRR8749030Uninduced18.228
SRR8749031Uninduced16.783
SRR8749032Uninduced15.616

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.537
SRR8400027Control-Root34.476

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved