Gene detail information of Glyur000497s00020178.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G50000.10Protein kinase superfamily protein
NRXP_004508858.10PREDICTED: dual specificity protein kinase zakA-like [Cicer arietinum]
COGYP_001958461.11.00E-28hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q2MHE4|HT1_ARATH5.00E-65Serine/threonine-protein kinase HT1
trEMBLtr|G7JPU2|G7JPU2_MEDTR0Serine/Threonine-kinase HT1-like protein {ECO:0000313|EMBL:AES91171.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0049745529446+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000497s00020178.1PF07714.12Pkinase_Tyr933641.90E-63


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control61.496
SRR1783600control62.146
SRR1783602moderate drought stress53.081
SRR1811619moderate drought stress53.133

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain54.082
DRR006520Root Summer glycyrrhizin high producing strain53.376
DRR006521Root Winter glycyrrhizin high producing strain107.914
DRR006522Root Winter glycyrrhizin high producing strain104.681
DRR006523Root Summer glycyrrhizin low producing strain74.924
DRR006524Root Summer glycyrrhizin low producing strain75.915
DRR006525Leaf Summer glycyrrhizin high producing strain32.781
DRR006526Leaf Summer glycyrrhizin high producing strain32.737

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)60.368
SRR2868004Drought Stress(Tissue:root)68.350
SRR2967015Control (Tissue:root)58.503

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave75.156
SRR9715740Leave66.864
SRR9715741Leave87.882
SRR9715739Root19.827
SRR9715742Root57.750
SRR9715743Root47.884

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h43.318
SRR8749028MeJA induced 9h70.543
SRR8749029MeJA induced 9h53.853
SRR8749030Uninduced46.373
SRR8749031Uninduced49.960
SRR8749032Uninduced49.639

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root52.937
SRR8400027Control-Root51.232

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved