Gene detail information of Glyur000497s00020193.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G09090.2 | 0 | respiratory burst oxidase homolog B |
| NR | XP_003591142.1 | 0 | Respiratory burst oxidase-like protein [Medicago truncatula] |
| COG | YP_007146260.1 | 2.00E-71 | putative ferric reductase [Cylindrospermum stagnale PCC 7417] |
| Swissprot | tr|Q948T9|RBOHB_SOLTU | 0 | Respiratory burst oxidase homolog protein B |
| trEMBL | tr|G7I8P3|G7I8P3_MEDTR | 0 | Respiratory burst oxidase-like protein {ECO:0000313|EMBL:AES61393.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00497 | 80918 | 85233 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13447 | RBOH | EC:1.6.3.- 1.11.1.- | MAPK signaling pathway - plant | map04016 |
| Plant-pathogen interaction | map04626 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000497s00020193.1 | PF08414.5 | NADPH_Ox | 3 | 50 | 2.90E-07 |
| Glyur000497s00020193.1 | PF01794.14 | Ferric_reduct | 203 | 360 | 9.30E-17 |
| Glyur000497s00020193.1 | PF08022.7 | FAD_binding_8 | 403 | 505 | 9.60E-29 |
| Glyur000497s00020193.1 | PF08030.7 | NAD_binding_6 | 512 | 686 | 2.20E-39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.017 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.079 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.023 |
| SRR2967015 | Control (Tissue:root) | 0.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.064 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.012 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.025 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.030 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.093 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.080 |
| SRR8749032 | Uninduced | 0.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.018 |
| SRR8400027 | Control-Root | 0.341 |