Gene detail information of Glyur000497s00020194.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G48050.20BAH domain ;TFIIS helical bundle-like domain
NRKHN18480.10hypothetical protein glysoja_006893 [Glycine soja]
trEMBLtr|K7KVT9|K7KVT9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G19640.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004978739793697-


Gene family

Gene familysubfamily
Transcription Factors FamilyIWS1
EAR motif-containing ProteinsIWS1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000497s00020194.1PF01426.13BAH521604.50E-08
Glyur000497s00020194.1PF08711.6Med263674164.70E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.582
SRR1783600control24.441
SRR1783602moderate drought stress38.280
SRR1811619moderate drought stress37.628

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.778
DRR006520Root Summer glycyrrhizin high producing strain23.902
DRR006521Root Winter glycyrrhizin high producing strain36.605
DRR006522Root Winter glycyrrhizin high producing strain35.150
DRR006523Root Summer glycyrrhizin low producing strain33.742
DRR006524Root Summer glycyrrhizin low producing strain32.781
DRR006525Leaf Summer glycyrrhizin high producing strain13.594
DRR006526Leaf Summer glycyrrhizin high producing strain13.525

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)40.870
SRR2868004Drought Stress(Tissue:root)55.764
SRR2967015Control (Tissue:root)60.286

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.579
SRR9715740Leave23.956
SRR9715741Leave30.482
SRR9715739Root11.665
SRR9715742Root49.879
SRR9715743Root44.846

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.850
SRR8749028MeJA induced 9h32.052
SRR8749029MeJA induced 9h19.706
SRR8749030Uninduced21.632
SRR8749031Uninduced29.722
SRR8749032Uninduced28.295

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.837
SRR8400027Control-Root33.071

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved