Gene detail information of Glyur000498s00016150.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G08500.11.00E-102MAPK/ERK kinase kinase 1
NRXP_006597333.10PREDICTED: mitogen-activated protein kinase kinase kinase 1-like isoform X1 [Glycine max]
COGYP_004271969.18.00E-28serine/threonine protein kinase [Planctomyces brasiliensis DSM 5305]
Swissprottr|Q39008|M3K1_ARATH7.00E-141Mitogen-activated protein kinase kinase kinase 1
trEMBLtr|I1MDR4|I1MDR4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G05400.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004982215226200+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13414MEKK1 EC:2.7.11.25 MAPK signaling pathway - plant map04016
Plant-pathogen interactionmap04626


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000498s00016150.1PF00069.20Pkinase2525055.00E-69


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.802
SRR1783600control3.837
SRR1783602moderate drought stress5.073
SRR1811619moderate drought stress5.061

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.210
DRR006520Root Summer glycyrrhizin high producing strain7.352
DRR006521Root Winter glycyrrhizin high producing strain11.756
DRR006522Root Winter glycyrrhizin high producing strain11.246
DRR006523Root Summer glycyrrhizin low producing strain13.244
DRR006524Root Summer glycyrrhizin low producing strain13.406
DRR006525Leaf Summer glycyrrhizin high producing strain7.807
DRR006526Leaf Summer glycyrrhizin high producing strain7.626

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.852
SRR2868004Drought Stress(Tissue:root)9.747
SRR2967015Control (Tissue:root)8.024

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.702
SRR9715740Leave8.801
SRR9715741Leave13.186
SRR9715739Root4.212
SRR9715742Root8.940
SRR9715743Root7.470

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.637
SRR8749028MeJA induced 9h15.693
SRR8749029MeJA induced 9h3.734
SRR8749030Uninduced13.908
SRR8749031Uninduced13.052
SRR8749032Uninduced4.956

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.186
SRR8400027Control-Root5.594

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved