Gene detail information of Glyur000498s00016152.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G22970.10homolog of separase
NRXP_003547059.20PREDICTED: separase-like [Glycine max]
Swissprottr|Q5IBC5|ESP1_ARATH0Separase
trEMBLtr|I1MDQ8|I1MDQ8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G05350.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004983364049857-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02365ESP1 EC:3.4.22.49 Cell cycle map04110
Cell cycle - yeastmap04111
Meiosis - yeastmap04113
Oocyte meiosismap04114


Gene Ontology

biological_process

GO:0006508  proteolysis


cellular_component

GO:0005634  nucleus


molecular_function

GO:0005515  protein binding

GO:0008233  peptidase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000498s00016152.1PF03568.12Peptidase_C50175421687.70E-105


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.312
SRR1783600control1.317
SRR1783602moderate drought stress1.476
SRR1811619moderate drought stress1.474

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.530
DRR006520Root Summer glycyrrhizin high producing strain1.504
DRR006521Root Winter glycyrrhizin high producing strain3.053
DRR006522Root Winter glycyrrhizin high producing strain3.045
DRR006523Root Summer glycyrrhizin low producing strain1.770
DRR006524Root Summer glycyrrhizin low producing strain1.881
DRR006525Leaf Summer glycyrrhizin high producing strain0.959
DRR006526Leaf Summer glycyrrhizin high producing strain0.947

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.259
SRR2868004Drought Stress(Tissue:root)3.697
SRR2967015Control (Tissue:root)3.267

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.409
SRR9715740Leave1.913
SRR9715741Leave2.152
SRR9715739Root0.384
SRR9715742Root0.952
SRR9715743Root0.900

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.219
SRR8749028MeJA induced 9h7.095
SRR8749029MeJA induced 9h1.672
SRR8749030Uninduced4.327
SRR8749031Uninduced1.424
SRR8749032Uninduced1.182

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.347
SRR8400027Control-Root3.202

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved