Gene detail information of Glyur000500s00018146.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G73740.14.00E-90UDP-Glycosyltransferase superfamily protein
NRXP_003524354.20PREDICTED: uncharacterized protein LOC100808262 isoform X1 [Glycine max]
COGYP_001194161.16.00E-68UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase [Flavobacterium johnsoniae UW101]
trEMBLtr|K7KRG7|K7KRG7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G34250.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005001311516898+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT28


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02563murG EC:2.4.1.227 Peptidoglycan biosynthesis map00550
Cell cycle - Caulobactermap04112
Vancomycin resistancemap01502


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0019277  UDP-N-acetylgalactosamine biosynthetic process

GO:0030259  lipid glycosylation


molecular_function

GO:0016758  transferase activity, transferring hexosyl groups

GO:0030246  carbohydrate binding

GO:0050511  undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000500s00018146.1PF03033.15Glyco_transf_28571921.20E-26
Glyur000500s00018146.1PF04101.11Glyco_tran_28_C2514021.80E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.565
SRR1783600control4.831
SRR1783602moderate drought stress4.556
SRR1811619moderate drought stress4.434

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.449
DRR006520Root Summer glycyrrhizin high producing strain4.552
DRR006521Root Winter glycyrrhizin high producing strain4.130
DRR006522Root Winter glycyrrhizin high producing strain3.797
DRR006523Root Summer glycyrrhizin low producing strain5.613
DRR006524Root Summer glycyrrhizin low producing strain6.270
DRR006525Leaf Summer glycyrrhizin high producing strain7.400
DRR006526Leaf Summer glycyrrhizin high producing strain7.181

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.420
SRR2868004Drought Stress(Tissue:root)11.388
SRR2967015Control (Tissue:root)11.258

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.572
SRR9715740Leave4.908
SRR9715741Leave10.831
SRR9715739Root1.950
SRR9715742Root5.958
SRR9715743Root4.915

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.289
SRR8749028MeJA induced 9h1.418
SRR8749029MeJA induced 9h0.856
SRR8749030Uninduced1.772
SRR8749031Uninduced0.454
SRR8749032Uninduced0.745

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.775
SRR8400027Control-Root9.667

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved