Gene detail information of Glyur000500s00018152.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G01830.20CHASE domain containing histidine kinase protein
NRXP_003530935.10PREDICTED: histidine kinase 4-like [Glycine max]
COGYP_006373193.12.00E-83multi-sensor hybrid histidine kinase [Tistrella mobilis KA081020-065]
Swissprottr|Q9C5U0|AHK4_ARATH0Histidine kinase 4
trEMBLtr|I1KQE9|I1KQE9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G05370.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005006538473453+


Gene family

Gene familysubfamily
Transcription Factors FamilyOrphans


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14489AHK2_3_4 EC:2.7.13.3 Plant hormone signal transduction map04075


Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system

GO:0007165  signal transduction

GO:0016310  phosphorylation


cellular_component

GO:0016020  membrane


molecular_function

GO:0000155  phosphorelay sensor kinase activity

GO:0004871  signal transducer activity

GO:0016772  transferase activity, transferring phosphorus-containing groups

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000500s00018152.1PF03924.8CHASE1092931.40E-40
Glyur000500s00018152.1PF00512.20HisKA3814467.40E-19
Glyur000500s00018152.1PF02518.21HATPase_c4996823.90E-33
Glyur000500s00018152.1PF00072.19Response_reg8679341.60E-13
Glyur000500s00018152.1PF00072.19Response_reg9569984.30E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.339
SRR1783600control7.363
SRR1783602moderate drought stress7.472
SRR1811619moderate drought stress7.385

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.904
DRR006520Root Summer glycyrrhizin high producing strain22.721
DRR006521Root Winter glycyrrhizin high producing strain0.229
DRR006522Root Winter glycyrrhizin high producing strain0.235
DRR006523Root Summer glycyrrhizin low producing strain14.066
DRR006524Root Summer glycyrrhizin low producing strain14.492
DRR006525Leaf Summer glycyrrhizin high producing strain4.792
DRR006526Leaf Summer glycyrrhizin high producing strain4.646

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.085
SRR2868004Drought Stress(Tissue:root)20.340
SRR2967015Control (Tissue:root)23.768

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.097
SRR9715740Leave1.220
SRR9715741Leave1.860
SRR9715739Root1.472
SRR9715742Root14.083
SRR9715743Root13.654

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.458
SRR8749028MeJA induced 9h4.564
SRR8749029MeJA induced 9h3.424
SRR8749030Uninduced3.716
SRR8749031Uninduced2.458
SRR8749032Uninduced1.723

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.747
SRR8400027Control-Root29.656