Gene detail information of Glyur000500s00018162.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G01818.11.00E-27PLATZ transcription factor family protein
NRXP_003630992.17.55E-114hypothetical protein MTR_8g105930 [Medicago truncatula]
trEMBLtr|G7LBI1|G7LBI1_MEDTR3.00E-114PLATZ transcription factor family protein {ECO:0000313|EMBL:AET05468.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00500127192129468-


Gene family

Gene familysubfamily
Transcription Factors FamilyPLATZ


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0005622  intracellular


molecular_function

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000500s00018162.1PF04640.9PLATZ1051571.30E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.988
SRR1783600control25.239
SRR1783602moderate drought stress12.205
SRR1811619moderate drought stress12.139

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.162
DRR006520Root Summer glycyrrhizin high producing strain20.669
DRR006521Root Winter glycyrrhizin high producing strain3.285
DRR006522Root Winter glycyrrhizin high producing strain2.693
DRR006523Root Summer glycyrrhizin low producing strain10.203
DRR006524Root Summer glycyrrhizin low producing strain10.625
DRR006525Leaf Summer glycyrrhizin high producing strain2.153
DRR006526Leaf Summer glycyrrhizin high producing strain2.239

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.003
SRR2868004Drought Stress(Tissue:root)4.420
SRR2967015Control (Tissue:root)6.108

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.835
SRR9715740Leave1.996
SRR9715741Leave1.614
SRR9715739Root0.929
SRR9715742Root2.309
SRR9715743Root2.400

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h29.372
SRR8749028MeJA induced 9h11.757
SRR8749029MeJA induced 9h11.644
SRR8749030Uninduced1.405
SRR8749031Uninduced1.967
SRR8749032Uninduced1.364

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.565
SRR8400027Control-Root20.889

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved