Gene detail information of Glyur000501s00030933.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G24660.10transmembrane kinase-like 1
NRXP_007140555.10hypothetical protein PHAVU_008G122400g [Phaseolus vulgaris]
COGYP_001192956.12.00E-19two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|P33543|TMKL1_ARATH0Putative kinase-like protein TMKL1 (Precursor)
trEMBLtr|V7B3Z1|V7B3Z1_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW12549.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005017494778117+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.10.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000501s00030933.1PF13855.1LRR_82132715.00E-07
Glyur000501s00030933.1PF07714.12Pkinase_Tyr4026691.40E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.423
SRR1783600control7.446
SRR1783602moderate drought stress9.715
SRR1811619moderate drought stress9.683

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.551
DRR006520Root Summer glycyrrhizin high producing strain10.237
DRR006521Root Winter glycyrrhizin high producing strain0.818
DRR006522Root Winter glycyrrhizin high producing strain0.799
DRR006523Root Summer glycyrrhizin low producing strain14.808
DRR006524Root Summer glycyrrhizin low producing strain15.275
DRR006525Leaf Summer glycyrrhizin high producing strain2.237
DRR006526Leaf Summer glycyrrhizin high producing strain2.226

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.990
SRR2868004Drought Stress(Tissue:root)18.077
SRR2967015Control (Tissue:root)29.101

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.824
SRR9715740Leave0.168
SRR9715741Leave0.491
SRR9715739Root11.639
SRR9715742Root10.328
SRR9715743Root9.704

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.989
SRR8749028MeJA induced 9h2.903
SRR8749029MeJA induced 9h3.953
SRR8749030Uninduced0.104
SRR8749031Uninduced0.124
SRR8749032Uninduced0.452

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.179
SRR8400027Control-Root23.903

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved