Gene detail information of Glyur000503s00017756.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G64050.19.00E-127glutamate tRNA synthetase
NRXP_003529003.11.92E-171PREDICTED: glutamate--tRNA ligase, chloroplastic/mitochondrial-like [Glycine max]
COGYP_004112198.14.00E-75glutamyl-tRNA synthetase [Desulfurispirillum indicum S5]
Swissprottr|Q43794|SYE_TOBAC4.00E-157Glutamate--tRNA ligase, chloroplastic/mitochondrial (Precursor)
trEMBLtr|K7L0Z1|K7L0Z1_SOYBN7.00E-172Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G12340.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0050329189354-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01885EARS, gltX EC:6.1.1.17 Porphyrin and chlorophyll metabolism map00860
Aminoacyl-tRNA biosynthesismap00970


Gene Ontology

biological_process

GO:0006418  tRNA aminoacylation for protein translation

GO:0043039  tRNA aminoacylation


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0000049  tRNA binding

GO:0000166  nucleotide binding

GO:0004812  aminoacyl-tRNA ligase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016876  ligase activity, forming aminoacyl-tRNA and related compounds

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000503s00017756.1PF00749.16tRNA-synt_1c1623842.10E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.059
SRR1783600control24.129
SRR1783602moderate drought stress17.320
SRR1811619moderate drought stress17.551

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain28.087
DRR006520Root Summer glycyrrhizin high producing strain28.706
DRR006521Root Winter glycyrrhizin high producing strain20.147
DRR006522Root Winter glycyrrhizin high producing strain19.204
DRR006523Root Summer glycyrrhizin low producing strain39.240
DRR006524Root Summer glycyrrhizin low producing strain39.222
DRR006525Leaf Summer glycyrrhizin high producing strain14.171
DRR006526Leaf Summer glycyrrhizin high producing strain13.922

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.248
SRR2868004Drought Stress(Tissue:root)47.739
SRR2967015Control (Tissue:root)38.524

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.623
SRR9715740Leave26.470
SRR9715741Leave32.916
SRR9715739Root11.223
SRR9715742Root18.662
SRR9715743Root17.950

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.828
SRR8749028MeJA induced 9h20.209
SRR8749029MeJA induced 9h9.866
SRR8749030Uninduced13.898
SRR8749031Uninduced5.820
SRR8749032Uninduced6.907

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root38.797
SRR8400027Control-Root36.614

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved