Gene detail information of Glyur000503s00017773.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G44530.10Phosphoribosyltransferase family protein
NRXP_003521029.10PREDICTED: ribose-phosphate pyrophosphokinase 5, chloroplastic-like isoform X1 [Glycine max]
COGYP_001865884.12.00E-176ribose-phosphate pyrophosphokinase [Nostoc punctiforme PCC 73102]
Swissprottr|O64888|KPRS5_ARATH0Ribose-phosphate pyrophosphokinase 5, chloroplastic (Precursor)
trEMBLtr|I1JMH3|I1JMH3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G24280.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00503120452126196+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00948PRPS, prsA EC:2.7.6.1 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Pentose phosphate pathwaymap00030
Purine metabolismmap00230


Gene Ontology

biological_process

GO:0009156  ribonucleoside monophosphate biosynthetic process

GO:0009165  nucleotide biosynthetic process

GO:0044249  cellular biosynthetic process


molecular_function

GO:0000287  magnesium ion binding

GO:0004749  ribose phosphate diphosphokinase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000503s00017773.1PF13793.1Pribosyltran_N892056.30E-49
Glyur000503s00017773.1PF14572.1Pribosyl_synth2913936.30E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control32.014
SRR1783600control32.093
SRR1783602moderate drought stress27.612
SRR1811619moderate drought stress27.261

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain33.439
DRR006520Root Summer glycyrrhizin high producing strain32.895
DRR006521Root Winter glycyrrhizin high producing strain23.427
DRR006522Root Winter glycyrrhizin high producing strain23.251
DRR006523Root Summer glycyrrhizin low producing strain41.943
DRR006524Root Summer glycyrrhizin low producing strain41.694
DRR006525Leaf Summer glycyrrhizin high producing strain39.591
DRR006526Leaf Summer glycyrrhizin high producing strain38.683

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.960
SRR2868004Drought Stress(Tissue:root)44.881
SRR2967015Control (Tissue:root)42.953

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave63.625
SRR9715740Leave78.346
SRR9715741Leave58.135
SRR9715739Root26.670
SRR9715742Root22.524
SRR9715743Root24.269

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h48.595
SRR8749028MeJA induced 9h30.670
SRR8749029MeJA induced 9h26.829
SRR8749030Uninduced18.904
SRR8749031Uninduced6.975
SRR8749032Uninduced11.404

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root67.983
SRR8400027Control-Root71.894

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved