Gene detail information of Glyur000506s00021889.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G61610.13.00E-78Galactose mutarotase-like superfamily protein
NRXP_003533724.11.16E-135PREDICTED: putative glucose-6-phosphate 1-epimerase-like isoformX1 [Glycine max]
COGYP_002355684.16.00E-49aldose 1-epimerase [Thauera sp. MZ1T]
Swissprottr|Q40784|AAPC_CENCI4.00E-86Putative glucose-6-phosphate 1-epimerase
trEMBLtr|K7LC03|K7LC03_SOYBN4.00E-136Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G06380.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005064982757037-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01792E5.1.3.15 EC:5.1.3.15 Glycolysis / Gluconeogenesis map00010


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0016853  isomerase activity

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000506s00021889.1PF01263.15Aldose_epim291013.20E-14
Glyur000506s00021889.1PF01263.15Aldose_epim1032444.40E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.573
SRR1783600control11.235
SRR1783602moderate drought stress20.584
SRR1811619moderate drought stress20.297

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.563
DRR006520Root Summer glycyrrhizin high producing strain5.295
DRR006521Root Winter glycyrrhizin high producing strain6.574
DRR006522Root Winter glycyrrhizin high producing strain6.755
DRR006523Root Summer glycyrrhizin low producing strain9.642
DRR006524Root Summer glycyrrhizin low producing strain9.921
DRR006525Leaf Summer glycyrrhizin high producing strain3.591
DRR006526Leaf Summer glycyrrhizin high producing strain3.490

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.315
SRR2868004Drought Stress(Tissue:root)13.652
SRR2967015Control (Tissue:root)15.788

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.010
SRR9715740Leave1.064
SRR9715741Leave1.488
SRR9715739Root0.055
SRR9715742Root0.750
SRR9715743Root0.706

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h58.258
SRR8749028MeJA induced 9h60.354
SRR8749029MeJA induced 9h64.467
SRR8749030Uninduced105.031
SRR8749031Uninduced74.354
SRR8749032Uninduced71.283

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.731
SRR8400027Control-Root9.119

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved