Gene detail information of Glyur000507s00030433.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36305.1 | 2.00E-95 | farnesylated protein-converting enzyme 2 |
| NR | XP_004516198.1 | 0 | PREDICTED: CAAX prenyl protease 2-like [Cicer arietinum] |
| Swissprot | tr|Q8GW19|FACE2_ARATH | 3.00E-122 | CAAX prenyl protease 2 |
| trEMBL | tr|K7LHW6|K7LHW6_SOYBN | 2.00E-178 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G08320.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00507 | 14537 | 30554 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K08658 | RCE1, FACE2 | EC:3.4.22.- | Terpenoid backbone biosynthesis | map00900 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000507s00030433.2 | PF02517.11 | Abi | 66 | 172 | 5.00E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.603 |
| SRR1783600 | control | 8.451 |
| SRR1783602 | moderate drought stress | 16.613 |
| SRR1811619 | moderate drought stress | 16.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.851 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.957 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.621 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.105 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.656 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.441 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.772 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 12.376 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.016 |
| SRR2967015 | Control (Tissue:root) | 12.740 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 12.245 |
| SRR9715740 | Leave | 13.061 |
| SRR9715741 | Leave | 18.923 |
| SRR9715739 | Root | 6.013 |
| SRR9715742 | Root | 10.402 |
| SRR9715743 | Root | 9.540 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.162 |
| SRR8749028 | MeJA induced 9h | 15.387 |
| SRR8749029 | MeJA induced 9h | 8.920 |
| SRR8749030 | Uninduced | 9.497 |
| SRR8749031 | Uninduced | 4.791 |
| SRR8749032 | Uninduced | 5.912 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 22.410 |
| SRR8400027 | Control-Root | 19.314 |