Gene detail information of Glyur000509s00016401.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G78800.12.00E-163UDP-Glycosyltransferase superfamily protein
NRXP_004496759.10PREDICTED: alpha-1,3/1,6-mannosyltransferase ALG2-like [Cicer arietinum]
COGYP_003640854.19.00E-08group 1 glycosyl transferase [Thermincola potens JR]
trEMBLtr|C6TI07|C6TI07_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G35950.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005094355446962-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03843ALG2 EC:2.4.1.132 2.4.1.257 N-Glycan biosynthesis map00510
Various types of N-glycan biosynthesismap00513


Gene Ontology

biological_process

GO:0009058  biosynthetic process


molecular_function

GO:0004378  GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity

GO:0033164  glycolipid 6-alpha-mannosyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000509s00016401.4PF00534.15Glycos_transf_1461158.10E-07
Glyur000509s00016401.4PF00534.15Glycos_transf_11181718.30E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.451
SRR1783600control9.446
SRR1783602moderate drought stress7.760
SRR1811619moderate drought stress7.611

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.697
DRR006520Root Summer glycyrrhizin high producing strain7.431
DRR006521Root Winter glycyrrhizin high producing strain7.132
DRR006522Root Winter glycyrrhizin high producing strain6.761
DRR006523Root Summer glycyrrhizin low producing strain5.814
DRR006524Root Summer glycyrrhizin low producing strain5.722
DRR006525Leaf Summer glycyrrhizin high producing strain2.905
DRR006526Leaf Summer glycyrrhizin high producing strain3.018

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.599
SRR2868004Drought Stress(Tissue:root)17.373
SRR2967015Control (Tissue:root)13.695

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.635
SRR9715740Leave5.431
SRR9715741Leave6.157
SRR9715739Root1.542
SRR9715742Root5.090
SRR9715743Root6.010

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.416
SRR8749028MeJA induced 9h16.520
SRR8749029MeJA induced 9h11.468
SRR8749030Uninduced11.514
SRR8749031Uninduced11.291
SRR8749032Uninduced8.184

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.126
SRR8400027Control-Root12.836

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved