Gene detail information of Glyur000510s00021549.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17900.1 | 2.00E-166 | SET domain group 37 |
| NR | XP_004500595.1 | 0 | PREDICTED: histone-lysine N-methyltransferase ASHR1-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q7XJS0|ASHR1_ARATH | 0 | Histone-lysine N-methyltransferase ASHR1 |
| trEMBL | tr|G7J3L4|G7J3L4_MEDTR | 0 | Histone-lysine N-methyltransferase {ECO:0000313|EMBL:AES71348.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00510 | 35509 | 42021 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | SET |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000510s00021549.1 | PF00856.23 | SET | 42 | 292 | 3.00E-12 |
| Glyur000510s00021549.1 | PF01753.13 | zf-MYND | 78 | 115 | 2.30E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.822 |
| SRR1783600 | control | 1.848 |
| SRR1783602 | moderate drought stress | 3.672 |
| SRR1811619 | moderate drought stress | 3.447 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.849 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.199 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.071 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.772 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.651 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.406 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.180 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.600 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.378 |
| SRR2967015 | Control (Tissue:root) | 4.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.051 |
| SRR9715740 | Leave | 1.159 |
| SRR9715741 | Leave | 1.472 |
| SRR9715739 | Root | 0.241 |
| SRR9715742 | Root | 1.111 |
| SRR9715743 | Root | 0.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.830 |
| SRR8749028 | MeJA induced 9h | 2.286 |
| SRR8749029 | MeJA induced 9h | 1.409 |
| SRR8749030 | Uninduced | 1.324 |
| SRR8749031 | Uninduced | 1.363 |
| SRR8749032 | Uninduced | 1.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.683 |
| SRR8400027 | Control-Root | 3.722 |