Gene detail information of Glyur000511s00022045.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G15870.10glycosyl hydrolase family 81 protein
NRXP_003555070.20PREDICTED: endo-1,3(4)-beta-glucanase 1-like [Glycine max]
COGYP_008154648.13.00E-116hypothetical protein SCE1572_41440 [Sorangium cellulosum So0157-2]
trEMBLtr|K7MWG8|K7MWG8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G05550.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005113607938106+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH81


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0016998  cell wall macromolecule catabolic process


molecular_function

GO:0052861  glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group

GO:0052862  glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000511s00022045.1PF03639.8Glyco_hydro_81136681.00E-203


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.693
SRR1783600control2.815
SRR1783602moderate drought stress0.766
SRR1811619moderate drought stress0.658

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.971
DRR006520Root Summer glycyrrhizin high producing strain4.146
DRR006521Root Winter glycyrrhizin high producing strain1.567
DRR006522Root Winter glycyrrhizin high producing strain1.522
DRR006523Root Summer glycyrrhizin low producing strain13.619
DRR006524Root Summer glycyrrhizin low producing strain13.073
DRR006525Leaf Summer glycyrrhizin high producing strain2.991
DRR006526Leaf Summer glycyrrhizin high producing strain2.880

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)76.914
SRR2868004Drought Stress(Tissue:root)142.466
SRR2967015Control (Tissue:root)126.928

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.837
SRR9715740Leave0.170
SRR9715741Leave1.656
SRR9715739Root2.339
SRR9715742Root18.188
SRR9715743Root17.744

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.719
SRR8749028MeJA induced 9h8.123
SRR8749029MeJA induced 9h4.351
SRR8749030Uninduced9.140
SRR8749031Uninduced16.851
SRR8749032Uninduced7.408

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.303
SRR8400027Control-Root26.707

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved