Gene detail information of Glyur000511s00022048.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G15880.1 | 3.00E-96 | |
| NR | KEH25273.1 | 0 | transmembrane protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072U815|A0A072U815_MEDTR | 0 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH25273.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00511 | 62900 | 67203 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.522 |
| SRR1783600 | control | 19.244 |
| SRR1783602 | moderate drought stress | 21.340 |
| SRR1811619 | moderate drought stress | 21.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.479 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.726 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.433 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.155 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.191 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.577 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.409 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 22.269 |
| SRR2868004 | Drought Stress(Tissue:root) | 19.753 |
| SRR2967015 | Control (Tissue:root) | 21.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 16.288 |
| SRR9715740 | Leave | 22.204 |
| SRR9715741 | Leave | 17.478 |
| SRR9715739 | Root | 5.866 |
| SRR9715742 | Root | 15.486 |
| SRR9715743 | Root | 14.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.042 |
| SRR8749028 | MeJA induced 9h | 14.228 |
| SRR8749029 | MeJA induced 9h | 10.200 |
| SRR8749030 | Uninduced | 10.797 |
| SRR8749031 | Uninduced | 5.658 |
| SRR8749032 | Uninduced | 5.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 34.483 |
| SRR8400027 | Control-Root | 30.256 |