Gene detail information of Glyur000512s00017076.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G72330.10alanine aminotransferase 2
NRXP_004510570.10PREDICTED: alanine aminotransferase 2, mitochondrial-like [Cicer arietinum]
COGYP_005845871.12.00E-36alanine-synthesizing transaminase [Ignavibacterium album JCM 16511]
Swissprottr|Q9LDV4|ALAT2_ARATH0Alanine aminotransferase 2, mitochondrial (Precursor)
trEMBLtr|G7L970|G7L970_MEDTR0Alanine aminotransferase {ECO:0000313|EMBL:AET01924.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005126382673766+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00814GPT, ALT EC:2.6.1.2 Carbon metabolism map01200
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Carbon fixation in photosynthetic organismsmap00710
Alanine, aspartate and glutamate metabolismmap00250
Arginine biosynthesismap00220


Gene Ontology

biological_process

GO:0009058  biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000512s00017076.3PF00155.16Aminotran_1_21615103.20E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control58.896
SRR1783600control58.935
SRR1783602moderate drought stress30.397
SRR1811619moderate drought stress30.094

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain42.990
DRR006520Root Summer glycyrrhizin high producing strain41.947
DRR006521Root Winter glycyrrhizin high producing strain114.273
DRR006522Root Winter glycyrrhizin high producing strain112.288
DRR006523Root Summer glycyrrhizin low producing strain54.376
DRR006524Root Summer glycyrrhizin low producing strain55.029
DRR006525Leaf Summer glycyrrhizin high producing strain19.943
DRR006526Leaf Summer glycyrrhizin high producing strain19.989

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)89.867
SRR2868004Drought Stress(Tissue:root)65.855
SRR2967015Control (Tissue:root)55.362

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave33.783
SRR9715740Leave36.452
SRR9715741Leave33.725
SRR9715739Root60.523
SRR9715742Root77.990
SRR9715743Root74.774

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h70.822
SRR8749028MeJA induced 9h325.698
SRR8749029MeJA induced 9h213.452
SRR8749030Uninduced152.168
SRR8749031Uninduced86.509
SRR8749032Uninduced115.988

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root50.585
SRR8400027Control-Root37.394

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved