Gene detail information of Glyur000512s00017079.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G14270.10phosphatidylinositol-4-phosphate 5-kinase family protein
NRXP_004510566.10PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like [Cicer arietinum]
COGNP_147591.23.00E-22thermosome alpha subunit [Aeropyrum pernix K1]
Swissprottr|Q9LUM0|FAB1B_ARATH01-phosphatidylinositol-3-phosphate 5-kinase FAB1B
trEMBLtr|A0A072TNV0|A0A072TNV0_MEDTR01-phosphatidylinositol-3-phosphate 5-kinase {ECO:0000313|EMBL:KEH18518.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005128389693398-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00921PIKFYVE, FAB1 EC:2.7.1.150 Inositol phosphate metabolism map00562
Phosphatidylinositol signaling systemmap04070
Phagosomemap04145
Regulation of actin cytoskeletonmap04810


Gene Ontology

biological_process

GO:0046488  phosphatidylinositol metabolic process


molecular_function

GO:0005524  ATP binding

GO:0016307  phosphatidylinositol phosphate kinase activity

GO:0046872  metal ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000512s00017079.1PF01363.16FYVE331012.00E-17
Glyur000512s00017079.1PF00118.19Cpn60_TCP14076503.90E-30
Glyur000512s00017079.1PF01504.13PIP5K157718071.20E-62


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.875
SRR1783600control7.994
SRR1783602moderate drought stress6.016
SRR1811619moderate drought stress5.897

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.568
DRR006520Root Summer glycyrrhizin high producing strain6.548
DRR006521Root Winter glycyrrhizin high producing strain9.119
DRR006522Root Winter glycyrrhizin high producing strain8.920
DRR006523Root Summer glycyrrhizin low producing strain8.842
DRR006524Root Summer glycyrrhizin low producing strain8.774
DRR006525Leaf Summer glycyrrhizin high producing strain4.620
DRR006526Leaf Summer glycyrrhizin high producing strain4.571

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.905
SRR2868004Drought Stress(Tissue:root)26.956
SRR2967015Control (Tissue:root)20.875

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.370
SRR9715740Leave10.067
SRR9715741Leave19.697
SRR9715739Root0.969
SRR9715742Root11.310
SRR9715743Root9.530

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.527
SRR8749028MeJA induced 9h23.166
SRR8749029MeJA induced 9h7.071
SRR8749030Uninduced24.075
SRR8749031Uninduced13.892
SRR8749032Uninduced8.173

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.571
SRR8400027Control-Root14.817

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved