Gene detail information of Glyur000512s00017088.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G43240.10ARID/BRIGHT DNA-binding domain-containing protein
NRXP_004510562.10PREDICTED: AT-rich interactive domain-containing protein 4-like [Cicer arietinum]
Swissprottr|Q6NQ79|ARID4_ARATH0AT-rich interactive domain-containing protein 4
trEMBLtr|V7AT26|V7AT26_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW07366.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00512118642125319-


Gene family

Gene familysubfamily
Transcription Factors FamilyARID


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000512s00017088.1PF01388.16ARID5976951.00E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.540
SRR1783600control11.383
SRR1783602moderate drought stress11.254
SRR1811619moderate drought stress11.057

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.908
DRR006520Root Summer glycyrrhizin high producing strain10.648
DRR006521Root Winter glycyrrhizin high producing strain12.078
DRR006522Root Winter glycyrrhizin high producing strain11.486
DRR006523Root Summer glycyrrhizin low producing strain14.223
DRR006524Root Summer glycyrrhizin low producing strain14.196
DRR006525Leaf Summer glycyrrhizin high producing strain9.876
DRR006526Leaf Summer glycyrrhizin high producing strain9.957

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.479
SRR2868004Drought Stress(Tissue:root)22.697
SRR2967015Control (Tissue:root)21.971

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.352
SRR9715740Leave19.462
SRR9715741Leave18.525
SRR9715739Root6.033
SRR9715742Root16.657
SRR9715743Root14.254

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.805
SRR8749028MeJA induced 9h62.316
SRR8749029MeJA induced 9h19.664
SRR8749030Uninduced54.715
SRR8749031Uninduced26.555
SRR8749032Uninduced18.239

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.562
SRR8400027Control-Root16.923

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved