Gene detail information of Glyur000513s00025388.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G47620.1 | 2.00E-42 | TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 |
| NR | XP_007157639.1 | 0 | hypothetical protein PHAVU_002G086600g [Phaseolus vulgaris] |
| Swissprot | tr|Q93Z00|TCP14_ARATH | 3.00E-53 | Transcription factor TCP14 |
| trEMBL | tr|V7CJV7|V7CJV7_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW29633.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00513 | 140119 | 141381 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | TCP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000513s00025388.1 | PF03634.8 | TCP | 68 | 189 | 1.30E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 33.345 |
| SRR1783600 | control | 33.540 |
| SRR1783602 | moderate drought stress | 43.306 |
| SRR1811619 | moderate drought stress | 43.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 28.124 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.028 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.065 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.986 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.157 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.950 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.061 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 20.713 |
| SRR2868004 | Drought Stress(Tissue:root) | 28.941 |
| SRR2967015 | Control (Tissue:root) | 39.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 31.028 |
| SRR9715740 | Leave | 39.086 |
| SRR9715741 | Leave | 31.624 |
| SRR9715739 | Root | 96.948 |
| SRR9715742 | Root | 49.104 |
| SRR9715743 | Root | 52.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 42.328 |
| SRR8400027 | Control-Root | 39.772 |