Gene detail information of Glyur000514s00017576.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G44080.1 | 2.00E-35 | Basic-leucine zipper (bZIP) transcription factor family protein |
| NR | XP_004496459.1 | 5.25E-96 | PREDICTED: G-box-binding factor 4-like isoform X3 [Cicer arietinum] |
| Swissprot | tr|P42777|GBF4_ARATH | 3.00E-43 | G-box-binding factor 4 |
| trEMBL | tr|V7BCH8|V7BCH8_PHAVU | 3.00E-88 | Uncharacterized protein {ECO:0000313|EMBL:ESW15544.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00514 | 61593 | 64873 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bZIP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000514s00017576.1 | PF00170.16 | bZIP_1 | 168 | 213 | 5.40E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 44.978 |
| SRR1783600 | control | 43.635 |
| SRR1783602 | moderate drought stress | 62.360 |
| SRR1811619 | moderate drought stress | 60.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 47.980 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 47.215 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 28.685 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.284 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 57.542 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 57.134 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.738 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 41.488 |
| SRR2868004 | Drought Stress(Tissue:root) | 47.194 |
| SRR2967015 | Control (Tissue:root) | 49.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 29.226 |
| SRR9715740 | Leave | 35.960 |
| SRR9715741 | Leave | 34.919 |
| SRR9715739 | Root | 32.045 |
| SRR9715742 | Root | 36.448 |
| SRR9715743 | Root | 32.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.115 |
| SRR8749028 | MeJA induced 9h | 21.894 |
| SRR8749029 | MeJA induced 9h | 13.671 |
| SRR8749030 | Uninduced | 10.841 |
| SRR8749031 | Uninduced | 5.225 |
| SRR8749032 | Uninduced | 6.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 60.174 |
| SRR8400027 | Control-Root | 48.037 |