Gene detail

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Gene detail information of Glyur000514s00017580.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G26330.1	4.00E-53	cytochrome P450, family 71, subfamily B, polypeptide 37
NR	XP_004499226.1	2.68E-140	PREDICTED: cytochrome P450 71B37-like [Cicer arietinum]
COG	YP_007100541.1	6.00E-28	cytochrome P450 [Chroococcidiopsis thermalis PCC 7203]
Swissprot	tr\|Q9LIP3\|C71BY_ARATH	1.00E-67	Cytochrome P450 71B37
trEMBL	tr\|G7I6G5\|G7I6G5_MEDTR	1.00E-136	Cytochrome P450 family 71 protein {ECO:0000313\|EMBL:AES59642.2}

Sequence

Transcript Sequence

>Glyur000514s00017580.1
ATGAAAAAGGTTCAAGGGGAGATTAGAAGCTTATTCGGGGGCAAAGATTTTATAAATGAGGATGACATTGAAAGGCTTCCTTATCTCAAAGCAGTGGTGAAGGAGTCCCTGAGACTGTTTCCACCGTCACCATTACTTTTGCCAAGAGAGACGATGGAAAGGTGTGAGATTGATGGGTATGAGATTGAAGCCAGAACAGTAGTAACCCTGAAGAGTTTTTACCCAGAAAGGTTCCTTGATGGAGGTTCATCTTCTTCATCGGTGGAGTTTAAAGGGACAGATTTTGAGATGATACCGTTTGGGGGTGGACGGAGAATGTGCCCCGCCATGAACATGGGAGTGAGCATCATTATAGCAGGAACGGACACAAGTTCAGCAACAATGGTTTGGGCCATGACAGCACTGATGAACAATCCTAGAGTGATGAAAAAGGTTCAAGGGGAGATTAGAAGCTTATTTGGGGGCAATGATTTTATAAACGAGAATGACATTGAAAGGCTTCCTTATCTTAAAGCAGTGGTGAAGGAGTCCCTGAGACTGTTCCCACCGTCACCATTACTTTTGCCAAGAGAGACGATGGAAAGGTGTGAGATTGATGGGTATGAGATTGAAGCCAGAACAGTAGTGTATGTTAATGCGTGGGCCATAGGAAGGGACCCTAAGATCTGGGAAGACCCTGAAGAGTTTTACCCAGAAAGGTTCCTTGATGGAGGTTCATCTTCTTCATCGGTGGAGTTTAAAGGGACAGATTTTGAGATGATACCGTTTGGGGGTGGACGGAGAATGTGCCCCGCCATGAACATGGGAGTGGTCACGGTTGAGCTCTCACTTGCTAATCTTCTCCACTCTTTTGATTGGGAACTGCCATGTGGTGTTGACAAATTGGATACGCAAGTGAAGCTGGGAATAACGATGAACAAGAAAATTGATCTTCAACTTGTGGCCAGGAAACCAAAACGCAAGGAACTAGATGCAATTTGTAAGCCCCGCATCATGGACGTGCTTGTGCTTCTTTCTTTATTGTCATCAATATCAATCTTGATTCTATTCATTAGTACCCACGGGCACAGAACAAAGAAAGCAAGAAGANCATCTCTTCCACCTGGTCCTACAGGTCTTCCTCTAATCGGAAACCTACACCAACTTGANACTTCATCCCCACACCACNGCTTATGGAAACTCTCCAAACACCATGGACCCCTCATGTCGTTGCGCCTTGGCTCTGTTCCAACCCTGGTGGTTTCCTCAGCAAAGATGGCCAAAGAAGTTTTGAAAACCCATGACCTCAAGTTTGCAAGCAGGCCACGTTTCCTTGGCCTGAGGAAACTGTCTTACAATGGCTTGGACTTGGGTTTTGCACCCTATGGCCCTTATTGGAGAGAAATGAAGAAACTTTGTGTCCTCCACCTCTTCAGTTCCCAACGTGTCCATTCTTTCCGCCCCATTCGAGAAAACGAAGTTGCCCAATTGATTCACAAACTATCATCAAAATATGAAGATAAAGTTGTCAACTTGACCGAAAAATTGATGTCTTTCAACAACTCCCTCATATGTAGCATAGCTTTGGGGAAAAAGTATGGTCGTGATTACGAGGAAGAGGTCGAATTGGGAAGAAACGGGAAAAAGGGTAGTAGGTTGCAGGTGTTGCTTAATGAGGCTCAGGCTTTGTTGANAGAGTTTTACTTCTCAGATCATTTTCCATTGATGGGGTGGATTGATAGACTCACGGGAACACTGTGGAGGCTTGATAAAACCTTCAAGGAGTTGGATATGTTGTACCAACGTGTNATCGATGACCACATGGATGCAGCCACAGACAGGCCTAAGACCAATGACCAACAAGTAGCAGATATCATTGACATCTTTTTGCAGATGATGAATAATCAATCCTNGATCATGACCAAAAAAAAAAAGATCAATGCCTGTGCTTCTTTCTTTATTAATCTCAATTGTATACATTATTATCCACAAACAGAGAACACAGAGTGCAAGAAGAAGAGCATCTCTTCCACCTGGTCCTGCAAGTCTTCCCCTGATTGGAAACCTACACCAACTTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00514	71981	82470	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B37

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000514s00017580.1	PF00067.17	p450	1	112	2.00E-22
Glyur000514s00017580.1	PF00067.17	p450	115	308	5.40E-61
Glyur000514s00017580.1	PF00067.17	p450	367	646	6.40E-28

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.687
SRR1783600	control	11.087
SRR1783602	moderate drought stress	10.990
SRR1811619	moderate drought stress	5.063

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.632
DRR006520	Root Summer glycyrrhizin high producing strain	0.118
DRR006521	Root Winter glycyrrhizin high producing strain	2.661
DRR006522	Root Winter glycyrrhizin high producing strain	0.352
DRR006523	Root Summer glycyrrhizin low producing strain	0.676
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.683
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.982
SRR2868004	Drought Stress(Tissue:root)	1.993
SRR2967015	Control (Tissue:root)	1.898

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	2.553
SRR9715740	Leave	0.933
SRR9715741	Leave	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.997
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.113
SRR8749028	MeJA induced 9h	1.366
SRR8749029	MeJA induced 9h	0.781
SRR8749030	Uninduced	1.057
SRR8749031	Uninduced	0.522
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	2.173
SRR8400027	Control-Root	1.854